To those interested in engine programming and Naughty Dog, Jason Gregory (the lead programmer at Naughty Dog) and referred to in this video has written a book on game engine architecture cleverly titled "Game Engine Architecture" You can find it here, http://www.gameenginebook.com/
@blackout62: I can only think of one off the top of my head, Cliff Bleszinski's new game Lawbreakers, if that is considered indie.
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